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Dear users, welcome to the new interface of the Charles University Publication Repository. We would appreciate it if you could take a moment of your time to provide us with feedback on the new design of the repository.
Dotazník pro zpětnou vazbu je dostupný na URL adrese / The feedback questionnaire is available at the URL address: https://forms.office.com/e/ueBL8SYPZt
Genomic characterization of ST38 NDM-5-producing Escherichia coli isolates from an outbreak in the Czech Republic
| dc.contributor.author | Chudějová, Kateřina | |
| dc.contributor.author | Sourenian-Samuelian, Tsolaire | |
| dc.contributor.author | Palkovičová, Jana | |
| dc.contributor.author | Stredanska, Katarina | |
| dc.contributor.author | Nechutná, Lucie | |
| dc.contributor.author | Vlková, Kateřina | |
| dc.contributor.author | Heringová, Vendula | |
| dc.contributor.author | Papagiannitsis, Costas C. | |
| dc.contributor.author | Hrabák, Jaroslav | |
| dc.contributor.author | Dolejská, Monika | |
| dc.contributor.author | Bitar, Ibrahim | |
| dc.date.accessioned | 2024-05-13T09:10:42Z | |
| dc.date.available | 2024-05-13T09:10:42Z | |
| dc.date.issued | 2024 | |
| dc.identifier.uri | https://hdl.handle.net/20.500.14178/2435 | |
| dc.description.abstract | A 2-year national genomic screening in the Czech Republic identified a notable prevalence of the New Delhi metallo-β-lactamase 5 (NDM-5)-producing Escherichia coli sequence type 38 (ST38) in the city of Brno. Forty-two ST38 E. coli isolates harbored the bla(NDM-5) gene on the chromosome. Virulence factors confirmed the persistence of these isolates through biofilm formation. Single Nucleotide Polymorphisms (SNPs)-based phylogeny and CRISPR assay typing showed minimal genomic variations, implying a clonally driven outbreak. Results suggest that this high-risk clone may impose a nationwide problem. | en |
| dc.language.iso | en | |
| dc.relation.url | https://doi.org/10.1128/aac.00133-24 | |
| dc.rights | Creative Commons Uveďte původ 4.0 International | cs |
| dc.rights | Creative Commons Attribution 4.0 International | en |
| dc.title | Genomic characterization of ST38 NDM-5-producing Escherichia coli isolates from an outbreak in the Czech Republic | en |
| dcterms.accessRights | openAccess | |
| dcterms.license | https://creativecommons.org/licenses/by/4.0/legalcode | |
| dc.date.updated | 2024-06-17T07:45:32Z | |
| dc.subject.keyword | Escherichia coli | en |
| dc.subject.keyword | ST38 | en |
| dc.subject.keyword | blaNDM-5 | en |
| dc.identifier.eissn | 1098-6596 | |
| dc.relation.fundingReference | info:eu-repo/grantAgreement/MSM//LX22NPO5103 | |
| dc.relation.fundingReference | info:eu-repo/grantAgreement/MZ0/NU/NU22-09-00645 | |
| dc.relation.fundingReference | info:eu-repo/grantAgreement/MZ0/NU/NU20J-05-00033 | |
| dc.date.embargoStartDate | 2024-06-17 | |
| dc.type.obd | 73 | |
| dc.type.version | info:eu-repo/semantics/acceptedVersion | |
| dc.identifier.doi | 10.1128/aac.00133-24 | |
| dc.identifier.utWos | 001203241800001 | |
| dc.identifier.eidScopus | 2-s2.0-85195584470 | |
| dc.identifier.obd | 647101 | |
| dc.identifier.pubmed | 38624228 | |
| dc.subject.rivPrimary | 30000::30300::30303 | |
| dcterms.isPartOf.name | Antimicrobial Agents and Chemotherapy | |
| dcterms.isPartOf.issn | 0066-4804 | |
| dcterms.isPartOf.journalYear | 2024 | |
| dcterms.isPartOf.journalVolume | 68 | |
| dcterms.isPartOf.journalIssue | 6 | |
| uk.faculty.primaryId | 111 | |
| uk.faculty.primaryName | Lékařská fakulta v Plzni | cs |
| uk.faculty.primaryName | Faculty of Medicine in Pilsen | en |
| uk.faculty.secondaryId | 54 | |
| uk.faculty.secondaryName | Fakultní nemocnice Plzeň | cs |
| uk.faculty.secondaryName | University Hospital in Pilsen | en |
| uk.department.primaryId | 100012968318 | |
| uk.department.primaryName | Biomedicínské centrum | cs |
| uk.department.primaryName | Biomedical Center | en |
| uk.department.secondaryId | 5000002737 | |
| uk.department.secondaryId | 1359 | |
| uk.department.secondaryName | Ústav mikrobiologie | cs |
| uk.department.secondaryName | Ústav mikrobiologie | en |
| uk.department.secondaryName | Ústav mikrobiologie | cs |
| uk.department.secondaryName | Department of Microbiology | en |
| dc.type.obdHierarchyCs | ČLÁNEK V ČASOPISU::článek v časopisu::původní článek | cs |
| dc.type.obdHierarchyEn | JOURNAL ARTICLE::journal article::original article | en |
| dc.type.obdHierarchyCode | 73::152::206 | en |
| uk.displayTitle | Genomic characterization of ST38 NDM-5-producing Escherichia coli isolates from an outbreak in the Czech Republic | en |
